Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M3 Chr16p11-13_UniqueNum	BreastC_M3 Chr16p11-13_pVal	BreastC_M3 Chr16p11-13_Unique	ColonC_M17 Chr19 Chr11q Chr16_UniqueNum	ColonC_M17 Chr19 Chr11q Chr16_pVal	ColonC_M17 Chr19 Chr11q Chr16_Unique
CETS1P54_01	4	GDE1|GSPT1|GTF3C1|PPP4C	8.84404536063e-05	10	0.000170511669104	CCP110|DCTN5|DCUN1D3|ERI2|LYRM1|MLEC|PALB2|POLL|REXO5|ZNF768	34	6.36923810865e-06	AKT1S1|ANAPC15|AP1B1|AP1M1|ARRB2|B3GAT3|CHID1|CTCF|DDX39A|DNMT1|EPN1|HNRNPD|IPO7|KAT5|LIN28A|MON1B|MTMR2|NKAPD1|NOSIP|NR1H2|PAFAH1B2|PPME1|PRKACA|PRPF19|PSMD13|RRAS|SIPA1|SZT2|TBC1D17|U2AF2|WDR74|XAB2|ZDHHC5|ZNF408
CREIGHTON_AKT1_SIGNALING_VIA_MTOR_DN	3	ALDOA|ATP6V0C|PPP4C	0.000837930771038	1	0.00074227447042	ATP6AP1	4	0.000933587071657	GPI|PAFAH1B3|PPP2R1A|TNFRSF12A
Chiche(PMID: 24644022)-2014_M6.10	5	CRAMP1|FAM234A|GTF3C1|MGRN1|RHOT2	9.28372283608e-06	5	7.22519401255e-07	ARFGAP1|CLN3|MAPK8IP3|SLC35C2|TAOK2	12	1.78449262709e-05	ATP13A1|CCS|CIC|CNOT3|CSNK1G2|NADSYN1|PNKP|PNPLA6|RPS6KA4|SRRT|STRN4|SURF4
Chiche(PMID: 24644022)-2014_M9.3	6	COG7|FBRS|HMOX2|NARFL|NUBP2|ZNF646	6.14214819977e-05	5	0.000121139483485	ARFRP1|ARMC5|DNASE1|P3H4|TAOK2	23	1.70348051044e-06	ABCC10|ADAT3|ATAD3A|ATG4D|ATN1|BRMS1|C2CD2L|DCAF15|EDC3|KPTN|MIER2|PTDSS2|RCE1|SETD1B|SLC39A3|SPPL3|TCTA|TICAM1|TKFC|UQCR11|USP35|ZFPL1|ZNF408
DAIRKEE_TERT_TARGETS_UP	10	DCTPP1|HIGD2A|NDUFB10|NTHL1|NUBP2|PPP4C|RAB40C|RHOT2|TELO2|WDR24	0.000328634176513	6	0.000657268353024	EMP2|HCFC1R1|NPRL3|NSMCE1|OGFR|PEBP1	61	1.28729185338e-15	AIP|ALKBH7|ATP6V0D1|BAX|BCAT2|BET1L|C11ORF68|C19ORF53|CAPN1|CCS|CDC34|CLPB|CLPP|COA4|CWC15|D2HGDH|DNMT1|DRAP1|DUS2|EIF3G|FAM96B|FARSA|GPR108|GSTP1|HMCES|ILF3|IPO13|ISOC2|KHSRP|LGALS3BP|MPHOSPH6|MRPL4|MRPL48|NDUFA13|NOB1|NUP93|OGDH|PIN1|PITPNM1|POLD1|POLR2E|PRPF31|PSMA1|PSMD13|R3HDM4|RFXANK|RNF126|RPL36|RPS5|SGTA|SLC1A5|SNRNP70|SNRPA|TCOF1|THAP11|THOC3|TRMT1|UBXN1|UQCR11|WDR74|ZNF777
DNA damage	8	INO80E|MPG|NTHL1|PAGR1|SLX1A|SLX4|STUB1|USP7	0.000433731779695	8	0.000864372376133	EME2|ERCC4|NSMCE1|PALB2|POLL|POLM|POLN|RTEL1	43	3.09118325608e-06	ALKBH3|BABAM1|BRD4|BRSK1|CDC14B|CHEK1|DDB1|E2F7|EME1|EMSY|ERCC1|FANCA|FBXO31|FEN1|FTO|H2AFX|LIG1|MGMT|MRE11|MSH6|MUS81|NFRKB|PNKP|POLD1|POLD4|POLE|PPP5C|PRPF19|RAD23A|RFWD3|RNF169|RPS3|RUVBL2|SFPQ|SSRP1|STK11|SWSAP1|TFPT|UHRF1|USP28|UVRAG|XAB2|XRCC1
DNA metabolic process [GoID:GO:0006259; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|IPI|ISS|NAS|TAS]	17	DCTPP1|DNAJA3|E4F1|INO80E|KCTD13|KIF22|MPG|NTHL1|NUDT16L1|PAGR1|PPP4C|SH2B1|SLX1A|SLX4|STUB1|UBE2I|USP7	0.000199245687524	15	0.000398491374668	DNASE1|DNASE1L2|EME2|ERCC4|ERI2|MAPK3|MARF1|NSMCE1|PALB2|PARN|POLL|POLM|POLN|RAG2|RTEL1	112	3.80519107603e-13	ACD|ALKBH3|ARRB2|BABAM1|BAX|CALR|CBX8|CCNE1|CCNO|CDC14B|CDC34|CDCA5|CHEK1|CHTF18|CTCF|DDB1|DNMT1|DNTT|DOT1L|E2F7|EME1|EMSY|ERCC1|EXOSC5|EXOSC6|FANCA|FEN1|FKBP6|FTO|GATAD2A|GINS2|GINS3|GRWD1|H2AFX|HCRT|HINFP|HIST1H4A|HMGA1|HNRNPD|HNRNPU|HRAS|KAT5|KDM4D|KLHDC3|LIG1|LONP1|MBD3|MCM2|MCM3|MEN1|MGMT|MRE11|MSH6|MTA1|MUS81|MYO18A|NAT10|NFIC|NFIX|NFRKB|NOP53|NUP98|ORAOV1|PIAS4|PLD6|PNKP|POLA2|POLD1|POLD4|POLE|POLR2C|POLR2E|POLR2G|POLR2I|PPP2R1A|PPP5C|PRKD2|PRMT7|PRPF19|RAD23A|RBM14|RFWD3|RMI2|RNASEH2A|RNF169|RPS3|RRM1|RUVBL2|S100A11|SFPQ|SIRT6|SMARCB1|SMG7|SSRP1|STAT6|SWSAP1|TCF3|TERF2|TERF2IP|TFPT|TMEM161A|TNKS1BP1|TOP3B|TRIM28|UHRF1|UPF1|USP28|UVRAG|WIZ|XAB2|XRCC1|ZPR1
DNA recombination [GoID:GO:0006310; evidenceTypes:IBA|IDA|IEA|IEP|IMP|IPI|ISS|NAS|TAS]	5	INO80E|PAGR1|PPP4C|SLX1A|SLX4	0.000182842378363	9	0.000114978718093	EME2|ERCC4|NSMCE1|PALB2|POLL|POLM|POLN|RAG2|RTEL1	28	0.000250706038632	CHEK1|EME1|ERCC1|EXOSC6|FEN1|GINS2|H2AFX|KAT5|KDM4D|KLHDC3|MRE11|MSH6|MUS81|NFRKB|ORAOV1|RBM14|RFWD3|RMI2|RUVBL2|SFPQ|SIRT6|STAT6|SWSAP1|TCF3|TERF2|TERF2IP|TFPT|XRCC1
DNA repair	8	INO80E|MPG|NTHL1|PAGR1|SLX1A|SLX4|STUB1|USP7	6.09264021589e-05	8	0.000119169351455	EME2|ERCC4|NSMCE1|PALB2|POLL|POLM|POLN|RTEL1	37	2.68345286282e-06	ALKBH3|BABAM1|CDC14B|CHEK1|DDB1|EME1|EMSY|ERCC1|FANCA|FEN1|FTO|H2AFX|LIG1|MGMT|MRE11|MSH6|MUS81|NFRKB|PNKP|POLD1|POLD4|POLE|PPP5C|PRPF19|RAD23A|RFWD3|RPS3|RUVBL2|SFPQ|SSRP1|SWSAP1|TFPT|UHRF1|USP28|UVRAG|XAB2|XRCC1
DNA repair [GoID:GO:0006281; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|IPI|ISS|NAS|TAS]	12	INO80E|KIF22|MPG|NTHL1|NUDT16L1|PAGR1|PPP4C|SLX1A|SLX4|STUB1|UBE2I|USP7	0.000193944737815	9	0.000387889449235	EME2|ERCC4|MARF1|NSMCE1|PALB2|POLL|POLM|POLN|RTEL1	68	2.63948641204e-11	ALKBH3|BABAM1|CBX8|CCNO|CDC14B|CDCA5|CHEK1|DDB1|DOT1L|EME1|EMSY|ERCC1|FANCA|FEN1|FTO|GINS2|H2AFX|HINFP|HIST1H4A|HMGA1|KAT5|KDM4D|LIG1|MEN1|MGMT|MRE11|MSH6|MTA1|MUS81|NFRKB|NOP53|ORAOV1|PIAS4|PNKP|POLD1|POLD4|POLE|POLR2C|POLR2E|POLR2G|POLR2I|PPP5C|PRPF19|RAD23A|RBM14|RFWD3|RMI2|RNASEH2A|RNF169|RPS3|RUVBL2|SFPQ|SIRT6|SMARCB1|SSRP1|SWSAP1|TERF2|TERF2IP|TFPT|TMEM161A|TNKS1BP1|TRIM28|UHRF1|UPF1|USP28|UVRAG|XAB2|XRCC1
GSE369_PRE_VS_POST_IL6_INJECTION_SOCS3_KO_LIVER_DN	7	ATP6V0C|CRAMP1|MAZ|NAGPA|RNF40|TSC2|TSR3	3.42064380669e-05	6	6.84128728966e-05	ERP29|GDI1|MAPK3|MLEC|PRPF6|SNN	38	3.23727127112e-12	AGRN|ANAPC15|ARAP1|ARRB2|ARSA|ATP6V0A1|BLVRB|BSG|BTBD2|CLPTM1|DDB1|DGKZ|FAM89B|GBF1|GCDH|GSTP1|MAP2K2|MAP3K11|MYO9B|NUCB1|PIP5K1C|POLE|PRKCSH|RAB11B|RANGAP1|RHOG|SART1|SH3GL1|SLC43A1|STXBP2|SUPT5H|TECR|TMEM259|TRIM28|VPS11|WBP2|ZFPL1|ZYX
GSE5099_UNSTIM_VS_MCSF_TREATED_MONOCYTE_DAY3_DN	6	ENO3|HAGH|METTL26|MRPL28|NAA60|XPO6	0.000137519631891	7	3.98615942043e-05	ARMC5|ATP6AP1|C16ORF62|CDIPT|PARN|RHBDF1|ZNF346	22	0.000235177669578	API5|CTDSP2|D2HGDH|DOT1L|EIF4G1|FHOD1|GSK3A|H2AFX|IPO13|MAP2K2|OPA3|PIEZO1|POLRMT|PPP2R1A|RAB43|SART1|TCOF1|TOLLIP|TSEN34|USP49|VARS|ZNRF1
GSE18804_SPLEEN_MACROPHAGE_VS_BRAIN_TUMORAL_MACROPHAGE_DN	8	CRAMP1|MKL2|MRPL28|MRPS34|NDUFB10|POLR3K|SNRNP25|USP7	1.23434422407e-06	7	2.46474199613e-06	CCP110|ERCC4|LCMT1|RAB11FIP3|SULT1A1|SULT1A2|VKORC1	31	3.94645200069e-09	AARS|APRT|CCNE1|CENPN|CFDP1|CMC2|CNOT1|COQ9|COX4I1|CTCF|DDX19A|DDX28|DEF8|EMC8|ETFB|FAM216A|GINS2|ITFG1|KATNB1|MAP1LC3B|MCM3|MON1B|MPHOSPH6|NAE1|PRMT7|RSL1D1|TERF2IP|TMEM208|UTP4|ZDHHC7|ZNF276
GSE18804_SPLEEN_MACROPHAGE_VS_TUMORAL_MACROPHAGE_DN	9	CRAMP1|GSPT1|HAGH|MKL2|NDUFAB1|NDUFB10|NUDT16L1|POLR3K|USP7	1.7850331398e-05	4	3.56131134989e-05	REXO5|SNHG9|SULT1A1|VKORC1	27	8.75492970841e-08	AARS|APRT|C16ORF91|CENPN|CFDP1|CHMP1A|CIAPIN1|EIF1AD|ETFB|FTO|GINS2|HSBP1|IST1|ITFG1|LRP2|MBTPS1|MLYCD|MON1B|MPHOSPH6|NAE1|OGFOD1|PTPMT1|RMI2|RPL13|TANGO6|ZBED5-AS1|ZFP90
GSE32034_LY6C_HIGH_VS_LOW_MONOCYTE_DN	8	AXIN1|CAPN15|PGP|RAB40C|RNPS1|STUB1|XPO6|ZNF764	0.000428779118293	3	0.00084762149148	LARP1|PRPF6|RRN3	24	9.93674510502e-06	AGRN|ATP6V0D1|BOLA2|CRY2|CTDSP2|GRAMD1A|LGALS3BP|LONP1|OSBP|PITPNM1|PPAN|PTOV1|RANBP10|RBM42|RELA|RHEBL1|SAFB|SART1|SFSWAP|SLC44A2|STX5|TRIR|VPS11|ZNRF1
GSE36527_CD69_NEG_VS_POS_TREG_CD62L_LOS_KLRG1_NEG_DN	12	BCL7C|E4F1|MLST8|NAA60|NME4|NUDT16L1|PGP|RAB40C|RHOT2|SH2B1|TBC1D10B|ZNF764	5.23690769248e-06	2	1.04734919688e-05	PRPF6|SPSB3	29	3.2341616947e-10	ATP6V0D1|CDC34|CORO1B|CTDSP2|CYTH2|DCAF15|ECSIT|EIF3F|FAM89B|GRAMD1A|MCCC1|MKNK2|MOB2|MRI1|NUP62|NXF1|PITPNM1|PKP3|RANBP10|RHEBL1|RHOG|SNRPA|SRF|STAT6|STK11|STX5|THAP12|TMEM160|UCK1
GSE38681_WT_VS_LYL1_KO_LYMPHOID_PRIMED_MULTIPOTENT_PROGENITOR_UP	7	AXIN1|CD2BP2|GDE1|RAB40C|TBC1D10B|TMEM186|UBALD1	9.30666694129e-05	5	0.000185864120477	CELA2A|SPSB3|UQCRC2|YPEL3|ZNF688	28	2.6921834871e-07	BET1L|C19ORF53|COMMD9|CRY2|CTDSP2|GOT2|HIKESHI|HRAS|MEN1|MOGS|PIAS4|PIP5K1C|PSMC4|PTBP1|RAB11B|RANBP3|SAC3D1|SLC3A2|SMIM7|SPHK2|SRPRA|THOC3|TIMM8B|TIMM29|TMEM208|TMEM223|YAP1|ZNF574
GSE43863_NAIVE_VS_LY6C_LOW_CXCR5NEG_CD4_EFF_TCELL_D6_LCMV_DN	6	FAM86C1|FAM173A|MPG|NDUFB10|PAM16|RAB40C	0.000356866268467	5	0.000681714002654	DECR2|P3H4|RAB11FIP3|SLC35C2|THOC6	24	3.20185342797e-05	APRT|BCKDHA|BET1L|CBX2|CCS|CLPB|COX8A|ENKD1|GADD45GIP1|HCFC1|IL4R|MEX3D|MUS81|NADSYN1|PPP1R14B|RAB3D|RDH13|S100A13|SF1|TAF10|TMEM134|VPS11|ZNF296|ZNHIT2
GSE45365_CD8A_DC_VS_CD11B_DC_DN	5	MKL2|NUBP1|POLR3K|SNRNP25|ZKSCAN2	0.000397619241856	6	0.000652015754309	BFAR|FOPNL|LYRM1|PARN|STX4|SULT1A1	24	0.000143222729404	ANKRD26|APRT|C16ORF91|CENPN|CHMP1A|CNOT1|COQ9|DEF8|EMC8|FAM96B|FAM216A|FTO|GINS2|ITFG1|KLHDC4|MPHOSPH6|MSH6|NAE1|PIEZO1|PLA2G15|RMI2|TERF2IP|TMEM208|UTP4
GSE45365_HEALTHY_VS_MCMV_INFECTION_BCELL_IFNAR_KO_DN	8	METTL26|MPG|NUBP1|POLR3K|RAB40C|UBE2I|USP7|ZKSCAN2	0.000107746411747	4	0.000215319756761	CCP110|FAM210B|SULT1A1|VKORC1	28	1.73066733828e-07	ANKRD26|APRT|BANP|C16ORF91|CENPN|COQ9|COX4I1|DDX28|EMC8|ENPP1|FAM216A|FTO|GINS2|IRF6|ITFG1|KLHDC4|KLHL36|MPHOSPH6|NAE1|NIP7|RAB25|RMI2|SPATA17|THAP12|TLDC1|UTP4|ZFP90|ZSCAN5A
Human Breast_Lee10_23genes (20068086-ST1-3)	4	PMM2|RNPS1|TRAP1|TUFM	0.000360504733549	0	0.000622089543703		4	9.89199233944e-05	APRT|DDX28|RPL13|RSL1D1
Human Lung_Broet09_171genes (19176396-SuppTable3)	20	CAPN15|CLEC16A|CRAMP1|FAHD1|FAM234A|GSPT1|HAGH|METTL22|MKL2|MRPL28|MRPS34|MSRB1|NDUFB10|NME3|NUBP1|NUBP2|PDPK1|PMM2|TMEM186|USP7	6.2191045988e-20	10	6.9857280387e-30	C16ORF72|DECR2|EME2|EMP2|ERCC4|LITAF|LUC7L|RRN3|SPSB3|TXNDC11	18	1.24382091969e-19	AP1G1|ATF7IP2|ATXN1L|CARHSP1|CFDP1|DGCR2|DHODH|DHX38|KARS|MAP2K2|PSMD7|RMI2|RPL18|TERF2IP|TMEM170A|TMEM191A|TXNL4B|ZNRF1
KIM_ALL_DISORDERS_DURATION_CORR_DN	6	ECI1|GTF3C1|NTHL1|RNPS1|TRAP1|TUFM	3.29646192169e-05	5	6.59292197587e-05	ATP6AP1|CDIPT|GDI1|HCFC1R1|MAPK3	30	1.86751955195e-11	ACD|ARRB2|CHMP2A|COX4I1|COX8A|DHPS|DNAJB2|DPF2|DTX4|ECSIT|EIF3G|ETFB|FTO|HRAS|IFT46|MADD|MRPL23|NDUFA7|NDUFS7|NRGN|NUP93|PAFAH1B3|PIN1|RPL13|RUVBL2|SAC3D1|SF3B2|SNRPA|TALDO1|TMEM147
KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN	25	ALG1|CRAMP1|DCTPP1|EARS2|FAM86B1|FAM173A|FUS|GSPT1|HMOX2|MAZ|METTL26|MRPS34|NAGPA|NDUFAB1|NDUFB10|NME4|NTHL1|RHOT2|SNRNP25|TBL3|TELO2|TRAP1|TSR3|USP7|WDR90	0.000343760660463	7	0.000687521320926	DANCR|GGA2|GLYR1|LUC7L|PEBP1|UPK3A|VKORC1	134	2.30057220419e-23	ACAT1|ADAM15|AKT2|ALG3|ARHGDIA|ATAD3A|B3GAT3|B4GAT1|BDH1|C11ORF98|C19ORF70|CALR|CCDC86|CCDC124|CCDC138|CD3EAP|CD320|CFDP1|CHMP1A|CHORDC1|CIAPIN1|CLPB|CLPTM1|CORO7|DAZAP1|DCUN1D5|DDIAS|DDX10|DDX19A|DEAF1|DEF8|DHODH|DUS3L|EI24|EIF3M|EIF4E2|ELOF1|EMC8|EWSR1|EXOSC5|FAM76B|FAM118B|FARSA|FBL|FBRSL1|FOXRED2|FUBP1|FUT4|GADD45GIP1|GOT2|GRWD1|HNRNPD|HOMER1|HSPBP1|ILF3|IPO7|ISOC2|JMJD8|KHSRP|LSM4|LSM7|MOGS|MPHOSPH6|MRI1|MRPL4|MRPL16|MRPL21|MRPL23|MRPS12|MSH6|MTCH2|NANOS1|NCLN|NDUFA11|NDUFB7|NDUFS3|NIP7|NRGN|NUP62|NUP160|PAFAH1B2|PARVB|PDCD2L|PLD6|POLR2E|PPAN|PPP1R14B|PRKACA|PRMT1|PRMT3|PRPF31|PRR7|PTMA|QTRT1|RANGAP1|RDH13|RNF126|RPS6KA4|RRP7A|RUVBL2|SFPQ|SKP2|SLC29A2|SLC37A4|SLC39A3|SMARCD1|SNHG4|SNRNP70|SRRT|SSBP3|SSSCA1|STIP1|STK11|TCF3|TCOF1|TEX261|THOP1|TIMM8B|TIMM10|TIMM13|TIMM50|TMEM120B|TMEM147|TNPO2|TOMM40|UBL5|UNC93B1|UQCC3|VARS|WDR74|WT1|ZNF574|ZNHIT2|ZSCAN5A
LU_EZH2_TARGETS_UP	8	ELOB|MCRIP2|MPG|NME3|PAGR1|RPUSD1|STUB1|ZNF629	0.00018775123413	6	0.000367465403403	AMDHD2|HAGHL|HCFC1R1|NUDCD3|OGFR|THOC6	32	8.03706485707e-06	COMTD1|ETFB|FAM71E1|GANAB|GFOD2|HYAL2|ISOC2|JOSD2|KLHDC3|LONP1|LSM7|MEX3D|MGMT|MKNK2|PIH1D1|PITX1|PLEKHJ1|POLR2C|PPP1R14B|PSMC3|RPL36|RPS6KB2|S100A13|SH3GL3|SSSCA1|THOC3|TMEM216|TRAPPC5|TRIP6|WDR74|WDR83|ZW10
MARTENS_TRETINOIN_RESPONSE_DN	17	CRAMP1|FAM173A|HIGD2A|MAZ|MRPS34|NDUFB10|NME3|NUDT16L1|PGP|TELO2|TMEM186|TUFM|ZNF200|ZNF598|ZNF629|ZNF646|ZSCAN32	1.60264486048e-05	13	3.20528972096e-05	ARFRP1|ATXN2L|BRICD5|CCDC78|DNASE1L2|EME2|ERP29|HAGHL|HCFC1R1|METRN|PRR22|RAB26|WFIKKN1	107	9.26833927911e-20	ACD|APRT|ATG4D|BABAM1|BAX|CALR|CBX2|CD3EAP|CDV3|CHMP2A|CLNS1A|CLP1|COMTD1|CORO1B|COX4I1|DDX49|DHPS|DRAP1|EIF3G|FADD|FAM89B|FAM216A|FARSA|FBXW9|FDX1L|FKBP2|FUT1|GRWD1|H2AFX|HIST1H3C|HIST1H4A|HMBS|HMGA1|HNRNPM|HNRNPU|KEAP1|LDHB|LPO|MBD3|MCM3|MRPL2|MRPL4|MRPL11|MRPL34|NANOS1|NAP1L4|NDUFA11|NIP7|NKAPD1|NT5DC2|PAQR4|PGLS|PKMYT1|PLD6|PLK1|PRMT1|PRRG2|PSENEN|PSMD7|PTMA|PTOV1|RAD23A|REX1BD|RFWD3|RNF126P1|RPL14|RPL18|RPL18A|RPL36|RPL37A|RPS3|RPS5|RPS6KB2|RPS9|RRAS|RRP7A|RSL1D1|SETD6|SFPQ|SLC1A5|SLC2A4RG|SLC29A2|SLC43A1|SNHG4|SPHK2|SYCE2|TEDC2|TIMM8B|TIMM10|TIMM10B|TIMM13|TM7SF2|TMEM126A|TMEM126B|TMEM138|TMEM208|TMEM216|TMEM258|TRIM28|UNC79|WEE1|WT1|ZBTB45|ZNF276|ZNF324|ZNF628|ZNHIT2
MODULE_152	5	ATP6V0C|NDUFAB1|NDUFB10|NME4|TRAP1	0.000432323771991	3	0.000834825922974	ATP6AP1|CLN3|UQCRC2	16	2.98216210078e-05	ATP6V0A1|ATP6V0D1|BCKDHA|CLPP|COX4I1|COX6B1|COX8A|GOT2|GPX4|NDUFA3|NDUFA7|NDUFB7|NDUFS3|NDUFV1|SDHD|UQCR11
NIKOLSKY_BREAST_CANCER_16P13_AMPLICON	39	AXIN1|CAPN15|CRAMP1|ELOB|FAHD1|FAM173A|FAM234A|HAGH|KCTD5|MCRIP2|METTL26|MPG|MRPL28|MRPS34|MSRB1|NARFL|NDUFB10|NME3|NME4|NTHL1|NUBP2|PIGQ|POLR3K|RAB40C|RHOT2|RPUSD1|SNRNP25|STUB1|TBL3|TELO2|TMEM8A|TRAF7|TSC2|TSR3|UBE2I|UNKL|WDR24|WDR90|ZNF598	1.04280879397e-25	28	7.39655071885e-92	CCDC78|CLCN7|DECR2|EME2|FBXL16|FLYWCH1|FLYWCH2|GFER|GNG13|GNPTG|HAGHL|HCFC1R1|IFT140|LMF1|LUC7L|MAPK8IP3|METRN|NPRL3|RAB11FIP3|RAB26|RGS11|RHBDF1|SLC9A3R2|SPSB3|THOC6|WFIKKN1|ZNF205|ZNF213	8	2.08561758793e-25	C16ORF91|CHTF18|JMJD8|PAQR4|PKMYT1|PRSS33|RHBDL1|TNFRSF12A
STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN	10	ALDOA|ELOB|GDE1|HAGH|HIGD2A|HMOX2|METTL26|MRPL28|NDUFAB1|NDUFB10	0.000335295310152	10	0.000669213999389	ATP6AP1|EMP2|GNG13|HAGHL|HCFC1R1|PDXDC1|RAB26|SEPHS2|SPSB3|UQCRC2	55	1.37662091413e-06	ARHGAP35|ASNA1|B4GAT1|BSCL2|C19ORF25|C19ORF70|CARM1|CFDP1|CLNS1A|CORO7|CYB561A3|DGCR2|EIF3F|EIF3K|ELOF1|FKBP2|GPI|HSPBP1|IST1|KXD1|LAMTOR1|LYSMD4|MRPL11|MRPL17|MRPS12|NDUFA7|NDUFA11|NDUFS3|NDUFS7|NFIX|NR1H2|PPP1CA|PRDX2|PSMC3|PSMC4|RAD23A|RPL18|SAC3D1|SELENOH|SMARCB1|SMIM7|SNRPD2|STIP1|TIMM8B|TLN1|TM7SF2|TMEM126A|TMEM147|TMEM208|TRIR|TRMT112|TXNL4B|UQCR11|VPS4A|ZDHHC8
TEL2_Q6	6	CD2BP2|HIRIP3|INO80E|PPP4C|RNPS1|ZNF646	9.64861526228e-06	9	1.79654749043e-05	ANKS3|C16ORF71|DCTN5|DCUN1D3|LIME1|LYRM1|PALB2|POLL|ZNF768	32	1.33175562026e-06	AGPAT1|ALDH16A1|ARAP1|ARRB2|C2CD2L|CYB561A3|DPP3|ESRRA|FIBP|FURIN|FXYD5|HMGA1|HYAL2|ITFG1|KAT5|LIN28A|LSR|MAP3K11|MED26|PAFAH1B2|PIH1D1|PRKACA|PSMD13|RAB43|SF3B4|SIPA1|TIMM10|TIMM10B|U2AF2|ZDHHC5|ZNF408|ZNF668
TORC1 signaling [GoID:GO:0038202; evidenceTypes:IBA|IDA|IMP]	3	CLEC16A|MLST8|TELO2	0.0003751399826	2	0.000310896512135	LARP1|NPRL3	6	0.000439383453065	AKT1S1|CASTOR1|KPTN|PIH1D1|STK11|SZT2
catalytic activity, acting on DNA [GoID:GO:0140097; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	4	MPG|NTHL1|SLX1A|SLX4	8.29454418639e-05	10	0.00012024963565	DNASE1|DNASE1L2|EME2|ERCC4|MAPK3|PARN|POLL|POLM|POLN|RTEL1	31	4.56412480779e-05	ACD|ALKBH3|CCNO|CHTF18|DNMT1|DNTT|EME1|ERCC1|FEN1|FTO|GINS2|HMGA1|HNRNPD|HNRNPU|LIG1|MCM2|MEN1|MGMT|MRE11|MUS81|PNKP|POLA2|POLD1|POLD4|POLE|RPS3|RUVBL2|TERF2|TOP3B|UHRF1|XRCC1
chr16p11	26	BCL7C|BOLA2B|C16ORF58|CD2BP2|DCTPP1|EIF3CL|FBRS|FUS|INO80E|KAT8|KCTD13|KIF22|MAZ|PAGR1|PHKG2|PRR14|RNF40|SETD1A|SH2B1|SULT1A4|TBC1D10B|TUFM|ZNF48|ZNF629|ZNF646|ZNF764	3.1683744165e-15	20	1.16795122376e-57	ARMC5|ATXN2L|CDIPT-AS1|CLUHP3|CTF1|GDPD3|HSD3B7|MAPK3|MVP|NUPR1|ORAI3|PRSS8|SEPHS2|STX4|TAOK2|VKORC1|YPEL3|ZNF688|ZNF720|ZNF768	7	6.336748833e-15	BOLA2|FBXL19|IL4R|SGF29|ZNF668|ZNF689|ZNF771
chr16p12	13	COG7|EARS2|ELOB|GDE1|GTF3C1|HIRIP3|KNOP1|NDUFAB1|NOMO2|PPP4C|UBFD1|XPO6|ZKSCAN2	0.000122885439298	20	2.80074346295e-38	ARL6IP1|C16ORF62|CCP110|CDIPT|CLN3|COQ7|DCTN5|DCUN1D3|ERI2|KIAA0556|LCMT1|LYRM1|METTL9|NSMCE1|PALB2|REXO5|RRN3|SULT1A1|SULT1A2|UQCRC2	2	0.000245770878595	IQCK|SLC5A2
chr16p13	69	ABCC1|ALG1|ATP6V0C|AXIN1|CAPN15|CLEC16A|CRAMP1|CREBBP|DEXI|DNAJA3|E4F1|ECI1|EEF2KMT|FAHD1|FAM234A|GSPT1|HAGH|HMOX2|KCTD5|MCRIP2|METTL22|METTL26|MGRN1|MKL2|MLST8|MPG|MRPL28|MRPS34|MSRB1|NAA60|NAGPA|NARFL|NDE1|NDUFB10|NME4|NMRAL1|NTHL1|NUBP2|NUDT16L1|PAM16|PDPK1|PGP|PIGQ|PMM2|POLR3K|RAB40C|RHOT2|RNPS1|RPUSD1|SLX4|SNRNP25|STUB1|TBL3|TELO2|TMEM8A|TRAF7|TRAP1|TSC2|UBALD1|UBE2I|UNKL|USP7|WDR24|WDR90|ZNF174|ZNF200|ZNF500|ZNF598|ZSCAN32	1.56185371166e-40	54	8.56361461943e-161	ABCA3|AMDHD2|ANKS3|BCKDK|BFAR|BICDL2|BRICD5|C16ORF71|CCDC78|CCDC154|CLCN7|DECR2|DNASE1|DNASE1L2|EME2|EMP2|ERCC4|FBXL16|FLYWCH1|FLYWCH2|GFER|GLYR1|GNG13|GNPTG|HAGHL|HCFC1R1|IFT140|LITAF|LMF1|LUC7L|MAPK8IP3|MARF1|METRN|NPRL3|PARN|PDXDC1|RAB11FIP3|RAB26|RGS11|RHBDF1|ROGDI|SLC9A3R2|SNHG9|SNN|SPSB3|TBC1D24|THOC6|THUMPD1|TXNDC11|UBN1|WFIKKN1|ZNF205|ZNF213|ZNF597	18	3.12370742331e-40	ATF7IP2|C16ORF91|CARHSP1|CASKIN1|CCNF|CHTF18|CORO7|JMJD8|PAQR4|PKMYT1|PRSS33|RHBDL1|RMI2|RSL1D1|SMIM22|TEDC2|TNFRSF12A|ZNF263
double-strand break repair [GoID:GO:0006302; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	4	NUDT16L1|PPP4C|SLX1A|SLX4	6.48127945995e-05	9	7.20625271838e-05	EME2|ERCC4|MARF1|NSMCE1|PALB2|POLL|POLM|POLN|RTEL1	27	5.75630620153e-05	BABAM1|CDCA5|CHEK1|EME1|ERCC1|FEN1|GINS2|H2AFX|HIST1H4A|KAT5|KDM4D|MGMT|MRE11|MTA1|MUS81|ORAOV1|PIAS4|PRPF19|RFWD3|RNF169|SFPQ|SIRT6|SWSAP1|TERF2IP|TNKS1BP1|UVRAG|XRCC1
iron-sulfur cluster assembly [GoID:GO:0016226; evidenceTypes:IBA|IDA|IEA|IGI|IMP|TAS]	4	BOLA2B|NARFL|NUBP1|NUBP2	0.000296318406718	0	0.000344217562568		3	0.000248419250869	BOLA2|CIAPIN1|FAM96B
metallo-sulfur cluster assembly [GoID:GO:0031163; evidenceTypes:IBA|IDA|IEA|IGI|IMP|TAS]	4	BOLA2B|NARFL|NUBP1|NUBP2	0.000296318406718	0	0.000344217562568		3	0.000248419250869	BOLA2|CIAPIN1|FAM96B
regulation of t-circle formation [GoID:GO:1904429; evidenceTypes:IMP|ISS|TAS]	2	SLX1A|SLX4	0.00024551628142	1	0.000116816782141	RTEL1	2	0.000374215780699	ERCC1|TERF2
regulation of telomere maintenance [GoID:GO:0032204; evidenceTypes:IC|IDA|IEA|IMP|ISS|NAS|TAS]	3	SLX1A|SLX4|USP7	0.000343891539127	4	0.000442012199659	ERCC4|MAPK3|PARN|RTEL1	12	0.000245770878595	ACD|ERCC1|HNRNPD|HNRNPU|MRE11|NAT10|PNKP|SIRT6|TERF2|TERF2IP|UPF1|XRCC1
